Mungle , Tushar and Hegde, Govardhan and Prabhu , Srikanth and Kini, Gopalakrishna N (2013) A survey on various computationally intensive parallel applications in High performance Computing System with OpenCL-MPI. In: Proceedings of RETCOMP - 2013, Jan 11-13, Dept of CSE, PESIT, Bangalore South Campus.
![]() |
PDF
Paper_in_RETCOMP.pdf - Published Version Restricted to Registered users only Download (974kB) | Request a copy |
Abstract
The secondary structure of Ribonucleic acid (RNA) sequence folds is taken into consideration. RNA structure analysis is a computationally complex task. As the sequence size increases the complexity become more to handle. This gives rise to handle the analysis using parallelization technique. In this paper a study on molecular analysis of RNA structure is presented using high performance computing. Parallelization can be achieved by the way of General-purpose Computing on Graphics Processing Unit (GPGPU) based systems.
Item Type: | Conference or Workshop Item (Paper) |
---|---|
Uncontrolled Keywords: | RNA, secondary structure, minimum free energy, GPGPU |
Subjects: | Engineering > MIT Manipal > Computer Science and Engineering |
Depositing User: | MIT Library |
Date Deposited: | 15 Mar 2013 05:23 |
Last Modified: | 15 Mar 2013 05:23 |
URI: | http://eprints.manipal.edu/id/eprint/79063 |
Actions (login required)
![]() |
View Item |