A survey on various computationally intensive parallel applications in High performance Computing System with OpenCL-MPI

Mungle , Tushar and Hegde, Govardhan and Prabhu , Srikanth and Kini, Gopalakrishna N (2013) A survey on various computationally intensive parallel applications in High performance Computing System with OpenCL-MPI. In: Proceedings of RETCOMP - 2013, Jan 11-13, Dept of CSE, PESIT, Bangalore South Campus.

[img] PDF
Paper_in_RETCOMP.pdf - Published Version
Restricted to Registered users only

Download (974kB) | Request a copy

Abstract

The secondary structure of Ribonucleic acid (RNA) sequence folds is taken into consideration. RNA structure analysis is a computationally complex task. As the sequence size increases the complexity become more to handle. This gives rise to handle the analysis using parallelization technique. In this paper a study on molecular analysis of RNA structure is presented using high performance computing. Parallelization can be achieved by the way of General-purpose Computing on Graphics Processing Unit (GPGPU) based systems.

Item Type: Conference or Workshop Item (Paper)
Uncontrolled Keywords: RNA, secondary structure, minimum free energy, GPGPU
Subjects: Engineering > MIT Manipal > Computer Science and Engineering
Depositing User: MIT Library
Date Deposited: 15 Mar 2013 05:23
Last Modified: 15 Mar 2013 05:23
URI: http://eprints.manipal.edu/id/eprint/79063

Actions (login required)

View Item View Item