Study on Molecular Structure Analysis using High Performance Computing

Kini, Gopalakrishna N (2012) Study on Molecular Structure Analysis using High Performance Computing. In: 22nd International Conference on Chemistry Education - 11th European Conference on Research in Chemical Education (ICCE-ECRICE-2012), 16-20, July 2012., University of Rome, Italy..

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Abstract

The secondary structure of Ribonucleic acid (RNA) sequence folds is taken into consideration. RNA structure analysis is a computationally complex task. As the sequence size increases the complexity become more to handle. This gives rise to handle the analysis using parallelization technique. In this paper a study on molecular analysis of RNA structure is presented using high performance computing. Parallelization can be achieved by the way of General-purpose Computing on Graphics Processing Unit (GPGPU) based systems.

Item Type: Conference or Workshop Item (Paper)
Uncontrolled Keywords: RNA, secondary structure, minimum free energy, GPGPU
Subjects: Engineering > MIT Manipal > Computer Science and Engineering
Depositing User: MIT Library
Date Deposited: 16 Mar 2013 05:35
Last Modified: 16 Mar 2013 05:35
URI: http://eprints.manipal.edu/id/eprint/79097

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